read

read(filename, *, items=None, time=None, keepdims=False, **kwargs)

Read all or a subset of the data from a dfs file

All dfs files can be subsetted with the items and time arguments. But the following file types also have the shown additional arguments:

  • Dfs2: area
  • Dfs3: layers
  • Dfsu-2d: (x,y), elements, area
  • Dfsu-layered: (xy,z), elements, area, layers

Parameters

Name Type Description Default
filename str | Path full path and file name to the dfs file. required
items str | int | Sequence[str | int] | None Read only selected items, by number (0-based), or by name, by default None (=all) None
time int | str | slice | None Read only selected time steps, by default None (=all) None
keepdims bool When reading a single time step only, should the time-dimension be kept in the returned Dataset? by default: False False
x Dfsu: Read only data for elements containing the (x,y) or (x,y,z) points(s), by default None required
y Dfsu: Read only data for elements containing the (x,y) or (x,y,z) points(s), by default None required
z Dfsu: Read only data for elements containing the (x,y) or (x,y,z) points(s), by default None required
area Dfs2/Dfsu: read only data within an area given by a bounding box of coordinates (left, lower, right, upper), by default None (=all) required
layers Dfs3/Dfsu-layered: read only data from specific layers, by default None (=all layers) required
error_bad_data raise error if data is corrupt, by default True, required
fill_bad_data_value fill value for to impute corrupt data, used in conjunction with error_bad_data=False default np.nan required

Returns

Name Type Description
Dataset A Dataset with specification according to the file type

See also

mikeio.open - open a Dfs file and only read the header

Examples

>>> ds = mikeio.read("ts.dfs0")
>>> ds = mikeio.read("ts.dfs0", items=0)
>>> ds = mikeio.read("ts.dfs0", items="Temperature")
>>> ds = mikeio.read("sw_points.dfs0, items="*Buoy 4*")
>>> ds = mikeio.read("ts.dfs0", items=["u","v"], time="2016")
>>> ds = mikeio.read("tide.dfs1", time="2018-5")
>>> ds = mikeio.read("tide.dfs1", time=slice("2018-5-1","2018-6-1"))
>>> ds = mikeio.read("tide.dfs1", items=[0,3,6], time=-1)
>>> ds = mikeio.read("tide.dfs1", time=-1, keepdims=True)
>>> ds = mikeio.read("era5.dfs2", area=(10,50,16,58))
>>> ds = mikeio.read("HD2D.dfsu")
>>> ds = mikeio.read("HD2D.dfsu", x=2.2, y=54.2)
>>> ds = mikeio.read("HD2D.dfsu", elements=183)
>>> ds = mikeio.read("HD2D.dfsu", elements=range(0,2000))
>>> ds = mikeio.read("HD2D.dfsu", area=(10,50,16,58))
>>> ds = mikeio.read("MT3D_sigma_z.dfsu", x=11.4, y=56.2)
>>> ds = mikeio.read("MT3D_sigma_z.dfsu", x=11.4, y=56.2, z=-1.1)
>>> ds = mikeio.read("MT3D_sigma_z.dfsu", elements=lst_of_elems)
>>> ds = mikeio.read("MT3D_sigma_z.dfsu", layers="bottom")
>>> ds = mikeio.read("MT3D_sigma_z.dfsu", layers=[-2,-1])
>>> ds = mikeio.read("HD2D.dfsu", error_bad_data=False) # replace corrupt data with np.nan
>>> ds = mikeio.read("HD2D.dfsu", error_bad_data=False, fill_bad_data_value=0.0) # replace corrupt data with 0.0